eDyNAmiC
Meet eDyNAmiC, whose challenge is to understand the biology of ecDNA generation and action, and develop approaches to target these mechanisms in cancer.
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Date: 11 June, 2025 - 13 June, 2025
Location: The Royal Society, 6-9 Carlton House Terrace, London SW1Y 5AG UK
Join us at the first edition of the Cancer Grand Challenges Conference Series, where we'll be convening researchers around the globe to discuss extrachromosomal DNA (ecDNA) — a field that Cancer Grand Challenges put in the spotlight, setting the extrachromosomal DNA challenge in 2020, and funding team eDyNAmiC, led by Paul Mischel.
All talks will take place in the Wellcome Lecture Hall. Refreshments and the poster session will take place in City 1, 2 and 3, which are all found on the ground floor.
8.30am - 9.30am | Registration Light refreshments will be served |
9.30am - 10am | Welcome From Cancer Grand Challenges and the organising committee |
Session one | Basic Mechanisms of ecDNA formation, maintenance and function |
10am - 10.45am | Paul Mischel (Chair and Organiser), Standford University, US Opening Plenary: Extrachromosomal DNA (ecDNA): Cancer’s Dynamic Circular Genome |
10.45am - 11.15am | Howard Chang (Organiser), Amgen, US Cancer genes beyond chromosomes |
11.15am - 11.45am | Break Refreshments will be served |
11.45am - 12.00pm | Venkat Sankar, Stanford University, US Selected talk: Genetic elements retain extrachromosomal DNA in dividing cancer cells |
12.00am - 12.15pm | Lotte Brückner, Charité and Max Delbrück Center Berlin, DE Selected talk: Reduced oncogene transcription by ecDNA micronucleation |
12.15pm - 12.45pm | Maite Huarte, University of Navarra, ES Noncoding RNAs in the coordination of DNA replication and genomic stability |
12.45pm - 1.00pm | Aurélie Diman, University of Geneva, CH Selected talk: Too Knotty to Resist: Twisted DNA Behavior Attracts SMC5/6 |
1pm - 2.00pm | Lunch Break Lunch will be served |
Session one continued | Basic mechanisms of ecDNA formation, maintenance and function |
2pm - 2.30pm | Peter Ly, University of Texas Southwestern Medical Center, US Mechanisms of ecDNA formation from chromothripsis |
2.30pm - 2.45pm | Ofer Shoshani, Weizmann Institute of Science, IL Selected talk: Chromosome breakage facilitates gene amplification in cancer |
2.45pm - 3.00pm | Andrea Degasperi, University of Cambridge, UK Selected talk: Pan-cancer analysis of amplicon-associated mutational signatures |
3.00pm - 3.30pm | Kathy Burns, Dana Farber Cancer Institute and Harvard Medical School, US A retrotransposon in cancer: the marker and the mutator |
3.30pm - 4pm | Break Refreshments will be served |
4pm - 4.45pm | Panel discussion Open questions in ecDNA research: the future of the field and integrating ecDNA throughout cancer research |
Session two | Impact of ecDNAs in cancer initiation, progression, evolution, detection and treatment |
4.45pm - 5.15pm | Charlie Swanton (Chair), Francis Crick Institute, UK The tissue-specific, immunoregulatory, and prognostic landscape of ecDNA in cancer |
5.15pm - 5.30pm | Selected talk: to be confirmed |
5.30pm - 5.45pm | Magnus Haughey, Barts Cancer Institute, UK Selected talk: Extrachromosomal DNA driven oncogene spatial heterogeneity and evolution in glioblastoma |
5.45pm - 6.15pm | Martine Roussel, St. Jude Children's Research Hospital, US MYC oncogenes are amplified in ecDNAs in paediatric embryonal brain tumors |
6.15pm | Poster session |
7.30pm - 9.30pm | Welcome Reception |
8.30am - 9am | Registration and light refreshments |
Session two continued | Impact of ecDNAs in cancer initiation, progression, evolution, detection and treatment |
9am - 9.30am | Mariam Jamal-Hanjani (Chair and organiser), University College London Cancer Institute, UK Tracking ecDNA from early to late stage lung cancer in the TRACERx and PEACE studies |
9.30am - 10am | Florent Mouliere, Cancer Research UK Manchester Institutue, UK ecDNA as a biomarker for cancer detection and treatment response from liquid biopsies |
10am - 10.15am | Vincenzo Corbo, University of Verona, IT Selected talk: MYC ecDNA promotes intratumor heterogeneity and plasticity in PDAC |
10.15am - 10.45am | Matt Vander Heiden, Massechusetts Institute of Technology, US Influence of metabolism on cancer progression |
10.45am - 11.15am | Break Refreshments will be served |
11.15am - 11.30am | Weini Huang, Queen Mary University of London, UK Selected talk: The impact of fitness copy-number dependence on ecDNA dynamics |
11.30am - 11.45am | Kadir C. Akdemir, MD Anderson Cancer Ceneter, US Selected talk: Integrative Multi-Omic Analysis Reveals Distinct Microenvironmental and Transcriptional Features of ecDNA-Driven Glioblastomas |
11.45am - 12pm | Aditi Gnanasekar, Stanford University, US Selected talk: Functional heterogeneity derived from the uneven segregation of extrachromosomal DNAs enables rapid tumor evolution |
12pm - 12.30pm | Birgitte Regenberg, University of Copenhagen, DK Uncovering the roles of extrachromosomal circular DNA in colorectal, renal and liver cancer |
12.30pm - 1.30pm | Lunch Break Lunch will be served |
Session three | Novel technologies to generate, manipulate and study ecDNAs |
1.30pm - 2pm | Vineet Bafna (Chair), University of California, San Diego, US The sequence and 3-dimensional structure of ecDNA |
2pm - 2.15pm | Jens Luebeck, University of California, San Diego, US Selected talk: AmpliconSuite: an end-to-end workflow for analyzing focal amplifications in cancer genomes |
2.15pm - 2.30pm | Sihan Wu, University of Texas Southwestern Medical Center, US Selected talk: A Microfluidic Approach for Sequence-Agnostic Enrichment of Extrachromosomal DNA |
2.30pm - 3pm | Isidro Cortes-Ciriano, EMBL's European Bioinformatics Institute, UK Rearrangement mechanisms underpinning ecDNA formation and evolution in human cancers |
3pm - 3.30pm | Break Refreshments will be served |
Session three continued | Novel technologies to generate, manipulate and study ecDNAs |
3.30pm - 3.45pm | Matthew G. Jones, Stanford University, US Selected talk: Detecting extrachromosomal DNA at single-cell resolution with scAmp |
3.45pm - 4.00pm | Jedrzej Jaworski, MRC Laboratory of Molecular Biology, US Selected talk: ecDNA replication is disorganised and vulnerable to replication stress |
4pm - 4.15pm | Ivy Tsz-Lo Wong, Stanford University, US Selected talk: Imaging methods and analysis for ecDNA studies |
4.15pm - 4.30pm | Sina Jasmin Wille, German Cancer Research Center, DE Selected talk: Quantification and characterization of MYCN amplification in Neuroblastoma |
4.30pm - 5pm | Andrea Ventura, Memorial Sloan Kettering Cancer Center, US In vivo and ex vivo engineering of oncogenic ecDNAs |
8am - 8.30am | Registration and light refreshments |
Session four | Targeting ecDNAs in cancer: novel therapeutics and the role of the immune system |
8.30am | Ben Cravatt (Chair), Scripps Research, US Activity-based protein profiling for ligand discovery of ecDNA-relevant biochemical pathways |
9.00am | Selected talk: to be confirmed |
9.15am | Marco Novais-Cruz, Princess Máxima Center for Pediatric Oncology, NL Selected talk: ecDNA-containing cells as a target of irradiation-induced damage |
9.30am | Yardena Samuels, Weizmann Institute of Science, IL Revisiting the neoantigen approach to cancer immunotherapy |
10am | Christian Hassig, Boundless Bio, US Selected talk: Leveraging the inherent replication stress of ecDNA to treat oncogene and resistance gene amplified cancers |
10.15am - 10.45am | Break Refreshments will be served |
Session four continued | Targeting ecDNAs in cancer: novel therapeutics and the role of the immune system |
10.45am | Panel discussion From science to medicine Co-chairs: Anton Henssen, Charité Berlin, DE & Mariam Jamal-Hanjani, University College London Cancer Institute, UK Panellists: Zachary Hornby, Boundless Bio, US and more to be confirmed. |
11.45am - 12.15pm | James Chen, UT Southwestern Medical Center, US Sensing ecDNA in cancer as danger |
12.15pm - 12.30pm | Closing remarks |
Abstract submissions are now closed. Selected talk speakers will be contacted at the end of April.
Registration is open and will close on 5 May 2025. We encourage you to register early to secure your place, as capacity is limited.
Please note that registration for this conference is a two-step process:
Registration includes VAT, a light breakfast, networking lunch and coffee breaks on all days, and a welcome reception on Wednesday 11 June. See fees below:
Student/PhD/Postdoc | £150* |
Academic/Clinical | £300* |
Industry | £500* |
*These prices do not include Eventbrite's ticketing fee.
Register via Eventbrite below.
ecDNA has emerged as one of the most pressing and challenging problems in cancer. ecDNAs, oncogene-containing circular DNA fragments found outside of chromosomes, play a crucial role in cancer development and progression. ecDNAs allow cancer cells to quickly evolve and adapt to changing environments and treatments, and thus are a significant clinical problem, as major contributors to treatment resistance and poor outcome. Conceptually ecDNA biology is fascinating – sitting at the interface of genetics and epigenetics. ecDNA biology is also vitally relevant - being linked to treatment resistance and poor outcome in patients. Understanding and exploiting ecDNA biology promises to transform the fundamental understanding of cancer and potentially revolutionise its treatment.
Although first observed over 50 years ago, the importance of ecDNA in cancer has only recently come to light, with the field undergoing a revolution, making major leaps towards understanding mechanistically how ecDNAs form and function, how they evolve to resist treatment, how they impact the immune system, and critically how they can be effectively targeted therapeutically.
This first edition of the Cancer Grand Challenges Conference Series aims to convene researchers from diverse backgrounds, from bench to bedside, across and beyond the ecDNA field, to provide an interdisciplinary forum to stimulate discussion around emerging concepts, open questions, what we need to do to answer them, and the future for this exciting field. The tools, datasets, pioneering technologies, and experimental models have now matured to an extent that the field is ripe for innovation as new investigators enter the field. The purpose of this meeting, in addition to sharing cutting edge science, is to further enhance and build upon an open, collaborative, and inclusive community that will advance the science rapidly for the benefit of patients.
Starting from the basic mechanisms of formation, maintenance and function, touching on transcription, replication and inheritance, and discussing where ecDNAs hijack existing processes and where they’ve put new mechanisms in place. Moving to how ecDNAs are involved in different cancers, and their implications for understanding tumour initiation, progression, evolution and resistance to treatment. The conference will also showcase novel technologies to generate, manipulate and study ecDNAs in human and animal tissues, bioinformatic tools to detect ecDNAs, as well as chemical probes as tools to understand and target ecDNA.
Topics will include:
This conference is being organised by a dedicated steering committee, chaired by:
Meet the committee members below.
Attendees wishing to cancel their place can receive a full refund up to 30 working days before the event start date. All cancellations must be made in writing to events@cancergrandchallenges.org by 12 May. Any cancellations received after this date will not be refunded. Attendees can send a replacement free of charge.
Cancer Grand Challenges is co-founded and operationally delivered by Cancer Research UK (CRUK). The refund policy, code of conduct and guiding principles will be implemented at all CRUK events delivered by Cancer Grand Challenges. Cancer Research UK is not liable for any travel or accommodation costs relating to attendee bookings.
The conference will be held at The Royal Society, located at 6-9 Carlton House Terrace, London SW1Y 5AG. Please see venue and transport link information below:
The Royal Society is in a central London location with many hotels near by. See below a few suggestions; we strongly recommend booking early to secure a good rate:
Please take a moment to familiarise yourself with the important information below regarding how we run our events: